EnhancerDB
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  3. rs116763020[chr6:30742141]
Enhancers that have rs116763020[chr6:30742141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116763020[chr6:30742141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30742134 30742149 TFAP2A JASPAR yes 101047484
chr6 30742134 30742149 TFAP2C JASPAR yes 101047485
chr6 30742135 30742146 TFAP2A JASPAR yes 101047486
chr6 30742135 30742146 TFAP2B JASPAR yes 101047487
chr6 30742135 30742146 TFAP2C JASPAR yes 101047488
chr6 30742136 30742145 TFAP2A JASPAR yes 101047489
Genes associated with rs116763020[chr6:30742141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 48938 Stomach 0.874434 6350