EnhancerDB
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  3. rs116772253[chr1:10564293]
Enhancers that have rs116772253[chr1:10564293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116772253[chr1:10564293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10564273 10564294 IRF1 JASPAR yes 26718208
chr1 10564280 10564297 ZNF410 JASPAR yes 26718209
chr1 10564283 10564294 CDX2 JASPAR yes 26718211
chr1 10564283 10564294 RUNX1 JASPAR yes 26718212
Genes associated with rs116772253[chr1:10564293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More