EnhancerDB
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  3. rs116772565[chr17:43391822]
Enhancers that have rs116772565[chr17:43391822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116772565[chr17:43391822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43391448 43393396 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764713
chr17 43391728 43392098 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764715
chr17 43391747 43392011 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764716
chr17 43391822 43391826 H1TF2 TRANSFAC yes 54443506
chr17 43391822 43391826 NFE TRANSFAC yes 54443507
chr17 43391822 43391826 SRF TRANSFAC yes 54443508
chr17 43391822 43394777 ZNF274 GTRD no Liver (HepG2) 21764717
Genes associated with rs116772565[chr17:43391822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More