EnhancerDB
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  3. rs116773558[chr2:27936284]
Enhancers that have rs116773558[chr2:27936284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116773558[chr2:27936284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27936279 27936292 EOMES JASPAR yes 72584331
chr2 27936281 27936291 TBR1 JASPAR yes 72584332
chr2 27936281 27936292 TBX2 JASPAR yes 72584333
chr2 27936282 27936292 TBX21 JASPAR yes 72584334
chr2 27936283 27936286 MYB TRANSFAC yes 72584335
chr2 27936283 27936291 MGA JASPAR yes 72584336
chr2 27936283 27936291 TBX15 JASPAR yes 72584337
chr2 27936283 27936291 TBX1 JASPAR yes 72584338
chr2 27936283 27936291 TBX4 JASPAR yes 72584339
chr2 27936283 27936291 TBX5 JASPAR yes 72584340
chr2 27936283 27936298 SCRT1 JASPAR yes 72584341
chr2 27936284 27936294 FIGLA JASPAR yes 72584342
chr2 27936284 27936294 ID4 JASPAR yes 72584343
chr2 27936284 27936294 MSC JASPAR yes 72584344
chr2 27936284 27936294 TCF3 JASPAR yes 72584345
chr2 27936284 27936294 TCF4 JASPAR yes 72584346
Genes associated with rs116773558[chr2:27936284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More