EnhancerDB
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  3. rs116779754[chr3:150457427]
Enhancers that have rs116779754[chr3:150457427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 150436865 150479875 enh7626
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr3 150457276 150457594 vista42787
VISTA
Transcript factors that have rs116779754[chr3:150457427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 150457264 150457455 SPI1 UCSC Txn Factor no Conserved 108530716
chr3 150457413 150457427 PAX6 JASPAR yes 6589550
chr3 150457413 150457427 PAX6 JASPAR yes 71067713
chr3 150457418 150457432 NR2F1 JASPAR yes 6589551
chr3 150457418 150457432 NR2F1 JASPAR yes 71067714
Genes associated with rs116779754[chr3:150457427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More