EnhancerDB
  1. Home
  2. SNP
  3. rs116831396[chr5:172226914]
Enhancers that have rs116831396[chr5:172226914]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172226784 172227709 vista50176
VISTA
Transcript factors that have rs116831396[chr5:172226914]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172226900 172226915 RFX5 JASPAR yes 67828786
chr5 172226900 172226915 RFX5 JASPAR yes 70763508
Genes associated with rs116831396[chr5:172226914], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More