EnhancerDB
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  3. rs116832940[chr2:27928595]
Enhancers that have rs116832940[chr2:27928595]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116832940[chr2:27928595]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27928593 27928609 SOX8 JASPAR yes 72583119
chr2 27928593 27928611 IRF2 JASPAR yes 72583120
chr2 27928594 27928615 IRF1 JASPAR yes 72583121
Genes associated with rs116832940[chr2:27928595], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More