EnhancerDB
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  3. rs116859250[chr1:16120654]
Enhancers that have rs116859250[chr1:16120654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116859250[chr1:16120654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16120645 16120665 ESR1 JASPAR yes 27001989
chr1 16120649 16120667 ESR2 JASPAR yes 27001990
chr1 16120650 16120665 ESR2 JASPAR yes 27001991
chr1 16120651 16120655 ESR1 TRANSFAC yes 27001992
chr1 16120651 16120666 AR JASPAR yes 27001993
Genes associated with rs116859250[chr1:16120654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More