EnhancerDB
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  3. rs116863460[chr1:8475856]
Enhancers that have rs116863460[chr1:8475856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116863460[chr1:8475856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8475847 8475859 YY1 JASPAR yes 26551209
chr1 8475852 8475856 YY1 TRANSFAC yes 26551210
chr1 8475853 8475863 HOXA13 JASPAR yes 26551211
chr1 8475853 8475863 HOXB13 JASPAR yes 26551212
chr1 8475854 8475864 HOXB13 JASPAR yes 26551213
chr1 8475854 8475864 HOXD13 JASPAR yes 26551214
chr1 8475855 8475865 GSX2 JASPAR yes 26551215
chr1 8475856 8475864 BSX JASPAR yes 26551216
Genes associated with rs116863460[chr1:8475856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More