EnhancerDB
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  3. rs116875547[chr3:188019437]
Enhancers that have rs116875547[chr3:188019437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187996529 188025195 enh48785
Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116875547[chr3:188019437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188019429 188019441 FOXC2 JASPAR yes 8469311
chr3 188019429 188019443 ONECUT1 JASPAR yes 8469312
chr3 188019429 188019443 ONECUT2 JASPAR yes 8469313
chr3 188019429 188019443 ONECUT3 JASPAR yes 8469314
chr3 188019430 188019440 CUX1 JASPAR yes 8469315
chr3 188019430 188019440 CUX2 JASPAR yes 8469316
chr3 188019430 188019441 FOXB1 JASPAR yes 8469317
chr3 188019430 188019441 FOXC1 JASPAR yes 8469318
chr3 188019436 188019451 FOXA1 JASPAR yes 8469319
chr3 188019437 188019449 FOXI1 JASPAR yes 8469320
chr3 188019437 188019451 POU4F1 JASPAR yes 8469321
chr3 188019437 188019452 FOXP1 JASPAR yes 8469322
chr3 188019437 188019452 HNF1A JASPAR yes 8469323
Genes associated with rs116875547[chr3:188019437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More