EnhancerDB
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  3. rs116922253[chr17:38675840]
Enhancers that have rs116922253[chr17:38675840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116922253[chr17:38675840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 21754352
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 108255234
chr17 38673467 38677708 ZNF274 GTRD no Blood (GM12878) 21754514
chr17 38673467 38677708 ZNF274 GTRD no Blood (GM12878) 108255253
chr17 38673550 38678157 ZNF274 GTRD no Blood (GM12878) 21754520
chr17 38673550 38678157 ZNF274 GTRD no Blood (GM12878) 108255258
chr17 38673550 38678157 ZNF274 GTRD no Blood (GM12878) 108255259
chr17 38673660 38676110 ZBTB33 GTRD no Lung (A549) 108255266
chr17 38673684 38676187 ZBTB33 GTRD no Lung (A549) 108255269
chr17 38673739 38677684 ZNF274 GTRD no Blood (GM12878) 21754536
chr17 38673739 38677684 ZNF274 GTRD no Blood (GM12878) 108255276
chr17 38673808 38676021 ZBTB33 GTRD no Lung (A549) 108255286
chr17 38673849 38675874 ZBTB33 GTRD no Lung (A549) 108255288
chr17 38673914 38676233 ZBTB33 GTRD no Lung (A549) 108255291
chr17 38673976 38675954 ZNF274 GTRD no Cervix (HeLa-S3) 21754556
chr17 38673976 38675954 ZNF274 GTRD no Cervix (HeLa-S3) 108255294
chr17 38674008 38676028 ZBTB33 GTRD no Lung (A549) 108255296
chr17 38674048 38677568 ZBTB33 GTRD no Lung (A549) 108255298
chr17 38674058 38675886 ZNF143 GTRD no Epithelial (MCF-7) 21754560
chr17 38674058 38675886 ZNF143 GTRD no Epithelial (MCF-7) 108255299
chr17 38674100 38677748 ZBTB33 GTRD no Lung (A549) 108255301
chr17 38674100 38677748 ZBTB33 GTRD no Lung (A549) 108255302
chr17 38674450 38675906 ZNF274 GTRD no Bone Marrow (K562) 21754603
chr17 38674450 38675906 ZNF274 GTRD no Bone Marrow (K562) 108255339
chr17 38674567 38677705 ZNF274 GTRD no Blood (GM12878) 21754618
chr17 38674567 38677705 ZNF274 GTRD no Blood (GM12878) 108255351
chr17 38674670 38677744 ZNF274 GTRD no Blood (GM12878) 21754641
chr17 38674670 38677744 ZNF274 GTRD no Blood (GM12878) 108255376
chr17 38674670 38677744 ZNF274 GTRD no Blood (GM12878) 108255377
chr17 38674676 38675891 ZNF274 GTRD no Bone Marrow (K562) 21754642
chr17 38674676 38675891 ZNF274 GTRD no Bone Marrow (K562) 108255378
chr17 38674857 38675912 ZNF274 GTRD no Bone Marrow (K562) 21754697
chr17 38674857 38675912 ZNF274 GTRD no Bone Marrow (K562) 108255439
chr17 38674872 38677647 ZNF274 GTRD no Blood (GM12878) 21754702
chr17 38674872 38677647 ZNF274 GTRD no Blood (GM12878) 108255444
chr17 38675199 38676223 ZNF274 GTRD no Bone Marrow (K562) 21754742
chr17 38675199 38676223 ZNF274 GTRD no Bone Marrow (K562) 108255495
chr17 38675700 38676693 ZNF274 GTRD no Blood (GM12878) 21754743
chr17 38675730 38676600 ZNF274 GTRD no Blood (GM12878) 21754744
Genes associated with rs116922253[chr17:38675840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More