EnhancerDB
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  3. rs116962830[chr19:2617571]
Enhancers that have rs116962830[chr19:2617571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116962830[chr19:2617571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 21837652
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 108363219
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 21837655
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 108363222
chr19 2616759 2617600 ZNF274 GTRD no Blood (GM12878) 21837661
chr19 2616759 2617600 ZNF274 GTRD no Blood (GM12878) 108363228
chr19 2617004 2617590 ZNF143 GTRD no Epithelial (MCF-7) 108363241
chr19 2617069 2617848 TCF7L2 GTRD no Colon (HCT116) 21837674
chr19 2617069 2617848 TCF7L2 GTRD no Colon (HCT116) 108363242
chr19 2617086 2617705 ZNF143 GTRD no Epithelial (MCF-7) 108363243
chr19 2617561 2617576 HSF1 JASPAR yes 112083850
chr19 2617566 2617581 HSF1 JASPAR yes 112083851
chr19 2617570 2617578 TEAD3 JASPAR yes 112083852
Genes associated with rs116962830[chr19:2617571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More