EnhancerDB
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Enhancers that have rs117054013[chr16:4347440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117054013[chr16:4347440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 21686440
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 108176173
chr16 4346950 4347536 ZNF274 GTRD no Liver (HepG2) 21686530
chr16 4346950 4347565 ZNF274 GTRD no Cervix (HeLa-S3) 21686531
chr16 4346996 4347522 ZNF274 GTRD no Liver (HepG2) 21686533
chr16 4347008 4347557 ZNF274 GTRD no Liver (HepG2) 21686534
chr16 4347016 4347494 ZNF274 GTRD no Liver (HepG2) 21686535
chr16 4347032 4347501 ZNF274 GTRD no Liver (HepG2) 21686536
chr16 4347299 4348620 ZNF143 GTRD no Epithelial (MCF-7) 21686537
chr16 4347406 4348649 TCF7L2 GTRD no Colon (HCT116) 21686538
chr16 4347424 4347444 TP63 JASPAR yes 9268184
Genes associated with rs117054013[chr16:4347440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More