EnhancerDB
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  3. rs117096599[chr12:125206819]
Enhancers that have rs117096599[chr12:125206819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117096599[chr12:125206819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125206609 125207194 ZNF143 GTRD no Epithelial (MCF-7) 21582337
chr12 125206810 125206822 HES5 JASPAR yes 124413443
chr12 125206810 125206822 HES7 JASPAR yes 124413444
chr12 125206810 125206822 PKNOX1 JASPAR yes 124413445
chr12 125206810 125206822 PKNOX2 JASPAR yes 124413446
chr12 125206810 125206822 TGIF1 JASPAR yes 124413447
chr12 125206810 125206822 TGIF2 JASPAR yes 124413448
Genes associated with rs117096599[chr12:125206819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More