EnhancerDB
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  3. rs117132424[chr12:125236719]
Enhancers that have rs117132424[chr12:125236719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117132424[chr12:125236719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125236518 125237789 ZNF274 GTRD no Cervix (HeLa-S3) 21582766
chr12 125236528 125237669 ZBTB33 GTRD no Lung (A549) 21582767
chr12 125236528 125237842 ZBTB33 GTRD no Lung (A549) 21582768
chr12 125236614 125237632 ZNF274 GTRD no Bone Marrow (K562) 21582769
chr12 125236653 125237786 ZNF143 GTRD no Epithelial (MCF-7) 21582770
chr12 125236662 125237615 ZNF274 GTRD no Bone Marrow (K562) 21582771
chr12 125236673 125237629 ZNF274 GTRD no Bone Marrow (K562) 21582772
chr12 125236689 125237605 ZNF143 GTRD no Epithelial (MCF-7) 21582773
chr12 125236700 125237611 ZNF274 GTRD no Blood (GM12878) 21582774
chr12 125236713 125236722 TFAP2A JASPAR yes 124417748
chr12 125236719 125236724 SP1 TRANSFAC yes 124417749
Genes associated with rs117132424[chr12:125236719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More