EnhancerDB
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  3. rs117143399[chr16:88849342]
Enhancers that have rs117143399[chr16:88849342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117143399[chr16:88849342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88848848 88849572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737246
chr16 88848848 88849572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223779
chr16 88848886 88849410 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737252
chr16 88848886 88849410 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223786
chr16 88849337 88849357 RREB1 JASPAR yes 12304049
chr16 88849339 88849344 SP1 TRANSFAC yes 12304050
chr16 88849342 88849352 SP1 JASPAR yes 12304051
Genes associated with rs117143399[chr16:88849342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More