EnhancerDB
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  3. rs117160013[chr12:125181460]
Enhancers that have rs117160013[chr12:125181460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117160013[chr12:125181460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125181054 125181704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581808
chr12 125181188 125181704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581810
chr12 125181246 125181566 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581812
chr12 125181261 125181637 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581813
chr12 125181283 125181787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581814
chr12 125181359 125181743 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581815
chr12 125181411 125181714 ZNF274 GTRD no Bone Marrow (K562) 21581816
chr12 125181421 125181681 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581817
chr12 125181443 125181707 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581818
chr12 125181459 125181463 TEAD2 TRANSFAC yes 124410165
chr12 125181459 125181464 TBP TRANSFAC yes 124410166
Genes associated with rs117160013[chr12:125181460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 125261402 125367214 - SCARB1 ENSG00000073060.11 125367214 79942 Heart 0.0224113 12680