EnhancerDB
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  3. rs117224364[chr1:25088778]
Enhancers that have rs117224364[chr1:25088778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117224364[chr1:25088778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25088759 25088778 PAX5 JASPAR yes 27528168
chr1 25088769 25088784 JUND JASPAR yes 27528171
chr1 25088769 25088789 TP63 JASPAR yes 27528172
chr1 25088770 25088783 JUN JASPAR yes 27528173
chr1 25088770 25088788 TP63 JASPAR yes 27528174
chr1 25088770 25088788 TP73 JASPAR yes 27528175
chr1 25088772 25088784 JDP2 JASPAR yes 27528176
chr1 25088777 25088788 USF1 JASPAR yes 27528177
chr1 25088777 25088788 USF2 JASPAR yes 27528178
chr1 25088778 25088788 TFEB JASPAR yes 27528179
chr1 25088778 25088788 TFEC JASPAR yes 27528180
Genes associated with rs117224364[chr1:25088778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More