EnhancerDB
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  3. rs117265727[chr1:235098409]
Enhancers that have rs117265727[chr1:235098409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117265727[chr1:235098409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235097468 235098857 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401513
chr1 235097468 235098857 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884718
chr1 235097911 235098475 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401534
chr1 235097911 235098475 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884742
chr1 235098012 235098512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401539
chr1 235098012 235098512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884748
chr1 235098149 235098713 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401540
chr1 235098238 235098628 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401541
chr1 235098239 235098635 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401542
chr1 235098249 235098605 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21401543
chr1 235098254 235099350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401544
chr1 235098284 235098560 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401545
chr1 235098296 235098587 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401546
chr1 235098299 235098666 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401547
chr1 235098301 235098611 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401548
chr1 235098301 235098685 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401549
chr1 235098305 235098841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401550
chr1 235098307 235098743 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401551
chr1 235098310 235098646 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401552
chr1 235098316 235098497 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401553
chr1 235098319 235098649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401554
chr1 235098324 235098594 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401555
chr1 235098333 235098824 ZNF274 GTRD no Bone Marrow (K562) 21401556
chr1 235098347 235098603 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401557
chr1 235098351 235098715 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401558
chr1 235098355 235098695 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401559
chr1 235098355 235098752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401560
chr1 235098355 235098765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401561
chr1 235098356 235098736 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401562
chr1 235098358 235098638 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401563
chr1 235098362 235098652 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401564
chr1 235098362 235098742 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401565
chr1 235098371 235098615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401566
chr1 235098374 235098663 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21401567
chr1 235098394 235098690 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401568
chr1 235098395 235098679 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401569
chr1 235098399 235098411 NHLH1 JASPAR yes 36335271
chr1 235098400 235098410 NHLH1 JASPAR yes 36335272
chr1 235098405 235099035 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401570
chr1 235098407 235098717 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21401571
Genes associated with rs117265727[chr1:235098409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More