EnhancerDB
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  3. rs117271574[chr19:5965126]
Enhancers that have rs117271574[chr19:5965126]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117271574[chr19:5965126]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5965114 5965129 ZIC4 JASPAR yes 112249206
chr19 5965115 5965129 GLIS2 JASPAR yes 112249207
chr19 5965115 5965129 GLIS3 JASPAR yes 112249208
chr19 5965117 5965129 INSM1 JASPAR yes 112249209
chr19 5965122 5965140 RARA JASPAR yes 112249210
chr19 5965124 5965128 LFA1 TRANSFAC yes 112249211
Genes associated with rs117271574[chr19:5965126], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More