EnhancerDB
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  3. rs117292872[chr17:28053549]
Enhancers that have rs117292872[chr17:28053549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117292872[chr17:28053549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28051687 28054658 ZNF274 GTRD no Bone Marrow (K562) 21749607
chr17 28051687 28054658 ZNF274 GTRD no Bone Marrow (K562) 108248081
chr17 28052504 28054327 ZNF274 GTRD no Blood (GM12878) 21749608
chr17 28052504 28054327 ZNF274 GTRD no Blood (GM12878) 108248082
chr17 28052989 28053874 ZNF274 GTRD no Liver (HepG2) 108248083
chr17 28053054 28053838 ZNF274 GTRD no Liver (HepG2) 108248084
chr17 28053073 28053756 ZNF274 GTRD no Bone Marrow (K562) 21749609
chr17 28053073 28053756 ZNF274 GTRD no Bone Marrow (K562) 108248085
chr17 28053101 28053853 ZNF274 GTRD no Liver (HepG2) 108248086
chr17 28053158 28053798 ZNF274 GTRD no Liver (HepG2) 108248087
chr17 28053195 28053908 ZNF274 GTRD no Liver (HepG2) 108248088
chr17 28053203 28053763 ZNF274 GTRD no Liver (HepG2) 108248089
chr17 28053254 28053729 ZNF274 GTRD no Liver (HepG2) 108248090
chr17 28053266 28053719 ZNF274 GTRD no Bone Marrow (K562) 21749610
chr17 28053266 28053719 ZNF274 GTRD no Bone Marrow (K562) 108248091
chr17 28053349 28053774 ZNF274 GTRD no Bone Marrow (K562) 21749611
chr17 28053349 28053774 ZNF274 GTRD no Bone Marrow (K562) 108248092
chr17 28053352 28053803 ZNF274 GTRD no Bone Marrow (K562) 21749612
chr17 28053352 28053803 ZNF274 GTRD no Bone Marrow (K562) 108248093
chr17 28053492 28053850 ZBTB33 GTRD no Brain (SK-N-SH) 21749613
chr17 28053492 28053850 ZBTB33 GTRD no Brain (SK-N-SH) 108248094
chr17 28053526 28054030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21749614
chr17 28053526 28054030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108248095
chr17 28053526 28054077 TCF7L2 UCSC Txn Factor no Conserved 108248096
chr17 28053527 28054103 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108248097
chr17 28053545 28053562 BCL6B JASPAR yes 53754114
chr17 28053548 28053559 STAT3 JASPAR yes 53754115
Genes associated with rs117292872[chr17:28053549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More