EnhancerDB
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Enhancers that have rs117298709[chr17:2106475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117298709[chr17:2106475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2106461 2106475 ONECUT3 JASPAR yes 52736781
chr17 2106461 2106476 HNF1A JASPAR yes 52736782
chr17 2106462 2106476 POU4F1 JASPAR yes 52736783
chr17 2106462 2106477 FOXA1 JASPAR yes 52736784
chr17 2106462 2106478 POU4F2 JASPAR yes 52736785
chr17 2106462 2106478 POU4F3 JASPAR yes 52736786
chr17 2106463 2106475 FOXC2 JASPAR yes 52736790
chr17 2106464 2106476 FOXI1 JASPAR yes 52736791
chr17 2106465 2106480 HNF1A JASPAR yes 52736792
chr17 2106466 2106482 POU4F2 JASPAR yes 52736793
chr17 2106467 2106481 SPIC JASPAR yes 52736794
chr17 2106471 2106478 NKX3-1 JASPAR yes 52736795
chr17 2106475 2106490 RFX5 JASPAR yes 52736796
Genes associated with rs117298709[chr17:2106475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More