EnhancerDB
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  3. rs117314514[chr16:85260229]
Enhancers that have rs117314514[chr16:85260229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117314514[chr16:85260229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85257967 85260329 TCF7L2 GTRD no Colon (HCT116) 21721559
chr16 85258105 85260305 TCF7L2 GTRD no Colon (HCT116) 21721563
chr16 85258107 85260265 TCF7L2 GTRD no Colon (HCT116) 21721564
chr16 85258234 85260260 TCF7L2 GTRD no Colon (HCT116) 21721566
chr16 85258988 85260289 ZNF143 GTRD no Epithelial (MCF-7) 21721577
chr16 85259111 85260308 ZNF274 GTRD no Bone Marrow (K562) 21721578
chr16 85259371 85260295 ZNF143 GTRD no Epithelial (MCF-7) 21721580
chr16 85259435 85260311 ZNF143 GTRD no Epithelial (MCF-7) 21721582
chr16 85260226 85260246 RREB1 JASPAR yes 12035288
Genes associated with rs117314514[chr16:85260229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More