EnhancerDB
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  3. rs117383549[chr17:28043108]
Enhancers that have rs117383549[chr17:28043108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117383549[chr17:28043108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28040466 28043718 ZNF274 GTRD no Bone Marrow (K562) 21749411
chr17 28040466 28043718 ZNF274 GTRD no Bone Marrow (K562) 108247636
chr17 28040466 28043718 ZNF274 GTRD no Bone Marrow (K562) 108247637
chr17 28040508 28043169 ZNF274 GTRD no Bone Marrow (K562) 21749412
chr17 28040508 28043169 ZNF274 GTRD no Bone Marrow (K562) 108247640
chr17 28040508 28043169 ZNF274 GTRD no Bone Marrow (K562) 108247641
chr17 28040565 28044290 ZNF274 GTRD no Bone Marrow (K562) 21749416
chr17 28040565 28044290 ZNF274 GTRD no Bone Marrow (K562) 108247654
chr17 28040565 28044290 ZNF274 GTRD no Bone Marrow (K562) 108247655
chr17 28040783 28043121 ZNF274 GTRD no Blood (GM12878) 21749426
chr17 28040783 28043121 ZNF274 GTRD no Blood (GM12878) 108247697
chr17 28040783 28043121 ZNF274 GTRD no Blood (GM12878) 108247698
chr17 28041281 28043449 ZNF274 GTRD no Bone Marrow (K562) 21749508
chr17 28041281 28043449 ZNF274 GTRD no Bone Marrow (K562) 108247928
chr17 28041281 28043449 ZNF274 GTRD no Bone Marrow (K562) 108247929
chr17 28043107 28043125 ESR2 JASPAR yes 53752605
chr17 28043108 28043123 ESR2 JASPAR yes 53752606
Genes associated with rs117383549[chr17:28043108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More