EnhancerDB
  1. Home
  2. SNP
  3. rs117394966[chr12:109242740]
Enhancers that have rs117394966[chr12:109242740]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117394966[chr12:109242740]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109242733 109242742 PITX3 JASPAR yes 123626862
chr12 109242733 109242743 GSC2 JASPAR yes 123626863
chr12 109242733 109242743 GSC JASPAR yes 123626864
chr12 109242737 109242743 ZNF354C JASPAR yes 123626865
Genes associated with rs117394966[chr12:109242740], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More