EnhancerDB
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  3. rs117400370[chr1:235133977]
Enhancers that have rs117400370[chr1:235133977]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs117400370[chr1:235133977]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235132889 235134652 POLR2A UCSC Txn Factor no Conserved 107885447
chr1 235132889 235134652 POLR2A UCSC Txn Factor no Conserved 107885448
chr1 235133762 235134422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402867
chr1 235133762 235134422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885526
chr1 235133840 235134130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402868
chr1 235133840 235134130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885527
chr1 235133841 235134244 ZBTB33 GTRD no Lung (A549) 107885528
chr1 235133859 235134100 ZNF274 GTRD no Liver (HepG2) 21402869
chr1 235133859 235134100 ZNF274 GTRD no Liver (HepG2) 107885529
chr1 235133928 235134284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402870
chr1 235133928 235134284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885530
chr1 235133945 235134349 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402871
chr1 235133945 235134349 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885531
chr1 235133950 235134320 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402872
chr1 235133950 235134320 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885532
chr1 235133955 235134302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402873
chr1 235133955 235134302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885533
chr1 235133974 235133979 NFY TRANSFAC yes 36340114
Genes associated with rs117400370[chr1:235133977], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More