EnhancerDB
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  3. rs117417230[chr12:110700548]
Enhancers that have rs117417230[chr12:110700548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110698345 110711799 enh29982
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117417230[chr12:110700548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110696267 110700945 ZNF274 GTRD no Bone Marrow (K562) 21572844
chr12 110697853 110700681 ZNF274 GTRD no Bone Marrow (K562) 21572850
chr12 110698004 110700552 ZNF274 GTRD no Bone Marrow (K562) 21572864
chr12 110699138 110700620 ZNF274 GTRD no Bone Marrow (K562) 21572982
chr12 110699181 110700839 ZNF274 GTRD no Bone Marrow (K562) 21572984
chr12 110700220 110700584 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21573028
chr12 110700230 110700630 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21573029
chr12 110700545 110700553 MEIS2 JASPAR yes 123687101
chr12 110700545 110700553 MEIS3 JASPAR yes 123687102
chr12 110700546 110700550 NFE TRANSFAC yes 123687103
Genes associated with rs117417230[chr12:110700548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More