EnhancerDB
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  3. rs117437229[chr16:88848809]
Enhancers that have rs117437229[chr16:88848809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117437229[chr16:88848809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 21737173
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223690
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223691
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223692
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 21737182
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223705
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223706
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223707
chr16 88848153 88849152 TCF7L2 GTRD no Colon (HCT116) 21737215
chr16 88848153 88849152 TCF7L2 GTRD no Colon (HCT116) 108223746
chr16 88848153 88849152 TCF7L2 GTRD no Colon (HCT116) 108223747
chr16 88848370 88848901 ZNF274 GTRD no Bone Marrow (K562) 21737230
chr16 88848370 88848901 ZNF274 GTRD no Bone Marrow (K562) 108223762
chr16 88848370 88848901 ZNF274 GTRD no Bone Marrow (K562) 108223763
chr16 88848456 88848941 TCF7L2 GTRD no Colon (HCT116) 21737231
chr16 88848456 88848941 TCF7L2 GTRD no Colon (HCT116) 108223764
chr16 88848489 88849135 TCF7L2 GTRD no Colon (HCT116) 21737232
chr16 88848489 88849135 TCF7L2 GTRD no Colon (HCT116) 108223765
chr16 88848491 88849171 TCF7L2 GTRD no Colon (HCT116) 21737233
chr16 88848491 88849171 TCF7L2 GTRD no Colon (HCT116) 108223766
chr16 88848572 88849287 TCF7L2 GTRD no Colon (HCT116) 21737234
chr16 88848572 88849287 TCF7L2 GTRD no Colon (HCT116) 108223767
chr16 88848601 88849193 ZNF143 GTRD no Epithelial (MCF-7) 21737235
chr16 88848601 88849193 ZNF143 GTRD no Epithelial (MCF-7) 108223768
chr16 88848741 88849257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21737236
chr16 88848741 88849257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223769
chr16 88848749 88849213 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21737237
chr16 88848749 88849213 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223770
chr16 88848773 88849169 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737238
chr16 88848773 88849169 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223771
chr16 88848792 88849148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737239
chr16 88848792 88849148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223772
chr16 88848797 88849201 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21737240
chr16 88848797 88849201 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223773
chr16 88848799 88848810 FOSL2 JASPAR yes 12303993
chr16 88848803 88848809 YY1 JASPAR yes 12303994
Genes associated with rs117437229[chr16:88848809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More