EnhancerDB
  1. Home
  2. SNP
  3. rs117473592[chr6:88437041]
Enhancers that have rs117473592[chr6:88437041]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117473592[chr6:88437041]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88437031 88437045 RORA JASPAR yes 103325557
chr6 88437039 88437043 ESR1 TRANSFAC yes 103325558
chr6 88437039 88437060 IRF1 JASPAR yes 103325559
chr6 88437041 88437056 PRDM1 JASPAR yes 103325560
chr6 88437041 88437056 STAT2 JASPAR yes 103325561
Genes associated with rs117473592[chr6:88437041], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More