EnhancerDB
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  3. rs117478978[chr12:120664271]
Enhancers that have rs117478978[chr12:120664271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117478978[chr12:120664271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120664260 120664275 HNF4A JASPAR yes 124156016
chr12 120664261 120664275 NR2F1 JASPAR yes 124156017
chr12 120664261 120664276 HNF4G JASPAR yes 124156018
chr12 120664261 120664276 NR2C2 JASPAR yes 124156019
Genes associated with rs117478978[chr12:120664271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More