EnhancerDB
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  3. rs117488978[chr12:52370529]
Enhancers that have rs117488978[chr12:52370529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52362566 52373215 enh14724
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs117488978[chr12:52370529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52370518 52370532 GATA2 JASPAR yes 120911854
Genes associated with rs117488978[chr12:52370529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 52400724 52409673 + GRASP ENSG00000161835.6 52400724 30195 Esophagus 0.24608 12075