EnhancerDB
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  3. rs117489190[chr12:125211855]
Enhancers that have rs117489190[chr12:125211855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117489190[chr12:125211855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125211663 125212043 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582359
chr12 125211663 125212043 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108069621
chr12 125211703 125212179 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582360
chr12 125211703 125212179 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069622
chr12 125211710 125212260 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582361
chr12 125211710 125212260 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069623
chr12 125211734 125212226 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582362
chr12 125211734 125212226 TFAP2C UCSC Txn Factor no Conserved 108069624
chr12 125211734 125212226 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069625
chr12 125211742 125212246 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582363
chr12 125211742 125212246 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069626
chr12 125211749 125212409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582364
chr12 125211749 125212409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069627
chr12 125211750 125212162 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582365
chr12 125211750 125212162 TFAP2A UCSC Txn Factor no Conserved 108069628
chr12 125211750 125212162 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069629
chr12 125211800 125212226 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21582366
chr12 125211800 125212226 E2F1 UCSC Txn Factor no Conserved 108069630
chr12 125211800 125212226 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108069631
chr12 125211810 125212274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582367
chr12 125211810 125212274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069632
chr12 125211829 125212038 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582368
chr12 125211829 125212038 CEBPB UCSC Txn Factor no Conserved 108069633
chr12 125211829 125212038 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069634
chr12 125211833 125212203 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582369
chr12 125211833 125212203 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069635
chr12 125211833 125212229 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582370
chr12 125211833 125212229 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069636
chr12 125211836 125212216 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582371
chr12 125211836 125212216 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069637
chr12 125211842 125211856 ONECUT1 JASPAR yes 124414192
chr12 125211842 125211856 ONECUT2 JASPAR yes 124414193
chr12 125211842 125211856 ONECUT3 JASPAR yes 124414194
chr12 125211848 125212312 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21582372
chr12 125211848 125212312 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108069638
chr12 125211851 125212221 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582373
chr12 125211851 125212221 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069639
Genes associated with rs117489190[chr12:125211855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More