EnhancerDB
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  3. rs11749499[chr5:172288697]
Enhancers that have rs11749499[chr5:172288697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11749499[chr5:172288697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172288692 172288706 PAX6 JASPAR yes 67835973
chr5 172288696 172288706 TBX21 JASPAR yes 67835974
chr5 172288696 172288707 TBX2 JASPAR yes 67835975
chr5 172288696 172288709 EOMES JASPAR yes 67835976
chr5 172288697 172288705 MGA JASPAR yes 67835977
chr5 172288697 172288705 TBX15 JASPAR yes 67835978
chr5 172288697 172288705 TBX1 JASPAR yes 67835979
chr5 172288697 172288705 TBX4 JASPAR yes 67835980
chr5 172288697 172288705 TBX5 JASPAR yes 67835981
chr5 172288697 172288707 TBR1 JASPAR yes 67835982
Genes associated with rs11749499[chr5:172288697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More