EnhancerDB
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  3. rs117548334[chr16:85244925]
Enhancers that have rs117548334[chr16:85244925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117548334[chr16:85244925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85244906 85244926 RREB1 JASPAR yes 12033210
chr16 85244906 85244927 IRF1 JASPAR yes 12033211
chr16 85244907 85244928 IRF1 JASPAR yes 12033212
chr16 85244912 85244933 IRF1 JASPAR yes 12033214
chr16 85244913 85244928 FOXP1 JASPAR yes 12033216
chr16 85244914 85244925 FOXP2 JASPAR yes 12033217
chr16 85244914 85244926 FOXC2 JASPAR yes 12033218
chr16 85244914 85244929 STAT2 JASPAR yes 12033219
chr16 85244915 85244930 FOXP1 JASPAR yes 12033220
chr16 85244918 85244933 FOXP1 JASPAR yes 12033221
chr16 85244924 85244944 TP53 JASPAR yes 12033222
chr16 85244925 85244935 HOXA13 JASPAR yes 12033223
Genes associated with rs117548334[chr16:85244925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More