EnhancerDB
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  3. rs11756376[chr6:29931309]
Enhancers that have rs11756376[chr6:29931309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11756376[chr6:29931309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29931301 29931319 NFYA JASPAR yes 101018350
chr6 29931304 29931313 VENTX JASPAR yes 101018351
chr6 29931304 29931314 ALX3 JASPAR yes 101018352
chr6 29931304 29931314 ESX1 JASPAR yes 101018353
chr6 29931304 29931314 GBX1 JASPAR yes 101018354
chr6 29931304 29931314 GBX2 JASPAR yes 101018355
chr6 29931304 29931314 GSX1 JASPAR yes 101018356
chr6 29931304 29931314 GSX2 JASPAR yes 101018357
chr6 29931304 29931314 HESX1 JASPAR yes 101018358
chr6 29931304 29931314 HOXB3 JASPAR yes 101018359
chr6 29931304 29931314 LBX2 JASPAR yes 101018360
chr6 29931304 29931314 LHX2 JASPAR yes 101018361
chr6 29931304 29931314 MIXL1 JASPAR yes 101018362
chr6 29931304 29931314 RAX JASPAR yes 101018363
chr6 29931305 29931309 H1TF2 TRANSFAC yes 101018364
chr6 29931305 29931309 NFE TRANSFAC yes 101018365
chr6 29931305 29931309 SRF TRANSFAC yes 101018366
chr6 29931305 29931313 BARX1 JASPAR yes 101018367
chr6 29931305 29931313 BSX JASPAR yes 101018368
chr6 29931305 29931313 EN1 JASPAR yes 101018369
chr6 29931305 29931313 ISX JASPAR yes 101018370
chr6 29931305 29931313 LHX9 JASPAR yes 101018371
chr6 29931305 29931313 MSX1 JASPAR yes 101018372
chr6 29931305 29931313 MSX2 JASPAR yes 101018373
chr6 29931305 29931313 PRRX1 JASPAR yes 101018374
chr6 29931305 29931313 RAX2 JASPAR yes 101018375
chr6 29931305 29931313 SHOX JASPAR yes 101018376
Genes associated with rs11756376[chr6:29931309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More