EnhancerDB
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  3. rs117566988[chr17:73865546]
Enhancers that have rs117566988[chr17:73865546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73855485 73871095 enh17381
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs117566988[chr17:73865546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73865327 73865591 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21788099
chr17 73865457 73865987 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21788100
chr17 73865539 73865548 THAP1 JASPAR yes 55973963
chr17 73865540 73866056 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21788101
chr17 73865541 73865548 SP1 TRANSFAC yes 55973964
chr17 73865541 73865556 ZIC4 JASPAR yes 55973965
chr17 73865543 73865548 SP1 TRANSFAC yes 55973966
Genes associated with rs117566988[chr17:73865546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More