EnhancerDB
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  3. rs117574543[chr16:81617236]
Enhancers that have rs117574543[chr16:81617236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs117574543[chr16:81617236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81615804 81617737 TCF7L2 GTRD no Colon (HCT116) 21717677
chr16 81615804 81617737 TCF7L2 GTRD no Colon (HCT116) 108209733
chr16 81616176 81617770 ZNF143 GTRD no Epithelial (MCF-7) 21717678
chr16 81616176 81617770 ZNF143 GTRD no Epithelial (MCF-7) 108209734
chr16 81616211 81618756 ZBTB33 GTRD no Lung (A549) 108209735
chr16 81616956 81618232 ZNF274 GTRD no Bone Marrow (K562) 108209736
chr16 81617136 81617668 TCF7L2 GTRD no Colon (HCT116) 21717679
chr16 81617136 81617668 TCF7L2 GTRD no Colon (HCT116) 108209737
chr16 81617225 81617240 PRDM1 JASPAR yes 11847368
chr16 81617234 81617238 NFE TRANSFAC yes 11847369
Genes associated with rs117574543[chr16:81617236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More