EnhancerDB
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  3. rs117594479[chr10:22969346]
Enhancers that have rs117594479[chr10:22969346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 22960987 22977555 enh27905
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs117594479[chr10:22969346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 22969329 22969347 NFYA JASPAR yes 125979176
chr10 22969344 22969353 SOX9 JASPAR yes 125979180
chr10 22969345 22969360 FOXP1 JASPAR yes 125979181
chr10 22969346 22969355 SRY JASPAR yes 125979182
chr10 22969346 22969358 FOXC2 JASPAR yes 125979183
Genes associated with rs117594479[chr10:22969346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More