EnhancerDB
  1. Home
  2. SNP
  3. rs117640223[chr17:43390171]
Enhancers that have rs117640223[chr17:43390171]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117640223[chr17:43390171]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43387058 43390224 ZNF274 GTRD no Cervix (HeLa-S3) 21764410
chr17 43387058 43390224 ZNF274 GTRD no Cervix (HeLa-S3) 108264463
chr17 43387182 43390265 ZBTB33 GTRD no Lung (A549) 108264464
chr17 43387864 43390203 ZNF274 GTRD no Liver (HepG2) 21764439
chr17 43387864 43390203 ZNF274 GTRD no Liver (HepG2) 108264490
chr17 43388596 43390291 ZBTB33 GTRD no Lung (A549) 108264555
chr17 43388684 43390241 ZBTB33 GTRD no Lung (A549) 108264557
chr17 43389140 43391154 POLR2A UCSC Txn Factor no Conserved 108264597
chr17 43389938 43391100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764703
chr17 43390095 43390495 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764704
chr17 43390163 43390173 HOXD11 JASPAR yes 54443242
chr17 43390163 43390174 HOXC13 JASPAR yes 54443243
chr17 43390169 43390179 MZF1 JASPAR yes 54443244
chr17 43390170 43390185 NR2C2 JASPAR yes 54443245
Genes associated with rs117640223[chr17:43390171], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More