EnhancerDB
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  3. rs117802933[chr1:226840978]
Enhancers that have rs117802933[chr1:226840978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117802933[chr1:226840978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226840899 226841559 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387026
chr1 226840899 226841559 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875884
chr1 226840967 226840978 ELF5 JASPAR yes 35827900
chr1 226840967 226840979 ELF1 JASPAR yes 35827901
chr1 226840967 226840980 ELF1 JASPAR yes 35827902
chr1 226840973 226841569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387027
chr1 226840973 226841569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875885
chr1 226840978 226840982 NFE TRANSFAC yes 35827905
Genes associated with rs117802933[chr1:226840978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More