EnhancerDB
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  3. rs117815702[chr16:3920498]
Enhancers that have rs117815702[chr16:3920498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3901576 3926575 enh3861
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117815702[chr16:3920498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3920494 3920498 ESR1 TRANSFAC yes 9237684
chr16 3920495 3920499 YY1 TRANSFAC yes 9237685
chr16 3920497 3920507 ALX3 JASPAR yes 9237686
chr16 3920497 3920507 GSX1 JASPAR yes 9237687
chr16 3920497 3920507 GSX2 JASPAR yes 9237688
chr16 3920497 3920507 MIXL1 JASPAR yes 9237689
chr16 3920497 3920507 MNX1 JASPAR yes 9237690
chr16 3920497 3920507 NOTO JASPAR yes 9237691
chr16 3920498 3920506 ISX JASPAR yes 9237692
chr16 3920498 3920506 LMX1A JASPAR yes 9237693
chr16 3920498 3920506 LMX1B JASPAR yes 9237694
chr16 3920498 3920506 NKX6-1 JASPAR yes 9237695
chr16 3920498 3920506 NKX6-2 JASPAR yes 9237696
chr16 3920498 3920506 PRRX1 JASPAR yes 9237697
chr16 3920498 3920506 RAX2 JASPAR yes 9237698
chr16 3920498 3920506 SHOX JASPAR yes 9237699
chr16 3920498 3920506 UNCX JASPAR yes 9237700
chr16 3920498 3920506 VAX1 JASPAR yes 9237701
Genes associated with rs117815702[chr16:3920498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More