EnhancerDB
  1. Home
  2. SNP
  3. rs117821709[chr1:19790679]
Enhancers that have rs117821709[chr1:19790679]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117821709[chr1:19790679]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19790678 19790692 SPI1 JASPAR yes 27194036
chr1 19790678 19790692 SPIC JASPAR yes 27194037
chr1 19790678 19790699 ZNF263 JASPAR yes 27194038
Genes associated with rs117821709[chr1:19790679], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More