EnhancerDB
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  3. rs117850074[chr1:19795370]
Enhancers that have rs117850074[chr1:19795370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117850074[chr1:19795370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19795369 19795373 H4TF2 TRANSFAC yes 27194791
chr1 19795369 19795383 EBF1 JASPAR yes 27194792
chr1 19795370 19795381 EBF1 JASPAR yes 27194793
Genes associated with rs117850074[chr1:19795370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More