EnhancerDB
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  3. rs117853408[chr17:774565]
Enhancers that have rs117853408[chr17:774565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117853408[chr17:774565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 774551 774566 SCRT1 JASPAR yes 52634738
chr17 774561 774571 PAX3 JASPAR yes 52634739
chr17 774561 774571 PAX7 JASPAR yes 52634740
Genes associated with rs117853408[chr17:774565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More