EnhancerDB
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  3. rs117882073[chr3:188001778]
Enhancers that have rs117882073[chr3:188001778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187996529 188025195 enh48785
Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117882073[chr3:188001778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188001765 188001786 IRF1 JASPAR yes 8466709
chr3 188001769 188001780 CDX2 JASPAR yes 8466710
chr3 188001770 188001781 HOXA10 JASPAR yes 8466711
chr3 188001771 188001780 CDX1 JASPAR yes 8466712
chr3 188001771 188001781 HOXA13 JASPAR yes 8466713
chr3 188001771 188001781 HOXB13 JASPAR yes 8466714
chr3 188001771 188001781 HOXD13 JASPAR yes 8466715
chr3 188001771 188001786 MEF2C JASPAR yes 8466716
chr3 188001772 188001787 MEF2A JASPAR yes 8466717
chr3 188001773 188001785 FOXC2 JASPAR yes 8466718
chr3 188001773 188001785 MEF2A JASPAR yes 8466719
chr3 188001773 188001785 MEF2B JASPAR yes 8466720
chr3 188001773 188001785 MEF2D JASPAR yes 8466721
chr3 188001774 188001784 MEF2A JASPAR yes 8466722
chr3 188001775 188001789 ONECUT3 JASPAR yes 8466723
chr3 188001777 188001788 PROP1 JASPAR yes 8466724
Genes associated with rs117882073[chr3:188001778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More