EnhancerDB
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  3. rs117923443[chr1:235119416]
Enhancers that have rs117923443[chr1:235119416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117923443[chr1:235119416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235118843 235119714 ZNF274 GTRD no Bone Marrow (K562) 21402601
chr1 235119166 235119647 ZNF143 GTRD no Epithelial (MCF-7) 21402602
chr1 235119234 235119598 ZNF143 GTRD no Epithelial (MCF-7) 21402603
chr1 235119270 235120264 ZNF274 GTRD no Bone Marrow (K562) 21402604
chr1 235119270 235120264 ZNF274 GTRD no Bone Marrow (K562) 107885393
chr1 235119331 235119771 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402605
chr1 235119412 235119417 ATF1 TRANSFAC yes 36338206
Genes associated with rs117923443[chr1:235119416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More