EnhancerDB
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  3. rs117948013[chr3:58021353]
Enhancers that have rs117948013[chr3:58021353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117948013[chr3:58021353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58021348 58021354 MZF1 JASPAR yes 2667222
chr3 58021350 58021360 ALX3 JASPAR yes 2667223
chr3 58021350 58021360 ESX1 JASPAR yes 2667224
chr3 58021350 58021360 GSX1 JASPAR yes 2667225
chr3 58021350 58021360 GSX2 JASPAR yes 2667226
chr3 58021350 58021360 LBX2 JASPAR yes 2667227
chr3 58021350 58021360 MIXL1 JASPAR yes 2667228
chr3 58021350 58021360 RAX JASPAR yes 2667229
chr3 58021351 58021355 H1TF2 TRANSFAC yes 2667230
chr3 58021351 58021355 NFE TRANSFAC yes 2667231
chr3 58021351 58021355 SRF TRANSFAC yes 2667232
chr3 58021351 58021359 BARX1 JASPAR yes 2667233
chr3 58021351 58021359 BSX JASPAR yes 2667234
chr3 58021351 58021359 DLX6 JASPAR yes 2667235
chr3 58021351 58021359 ISX JASPAR yes 2667236
chr3 58021351 58021359 LBX1 JASPAR yes 2667237
chr3 58021351 58021359 LHX9 JASPAR yes 2667238
chr3 58021351 58021359 MSX1 JASPAR yes 2667239
chr3 58021351 58021359 MSX2 JASPAR yes 2667240
chr3 58021351 58021359 NKX6-2 JASPAR yes 2667241
chr3 58021351 58021359 PRRX1 JASPAR yes 2667242
chr3 58021351 58021359 RAX2 JASPAR yes 2667243
chr3 58021351 58021359 SHOX JASPAR yes 2667244
chr3 58021351 58021359 UNCX JASPAR yes 2667245
chr3 58021351 58021361 HOXA13 JASPAR yes 2667246
chr3 58021351 58021361 HOXB13 JASPAR yes 2667247
chr3 58021351 58021361 HOXD13 JASPAR yes 2667248
chr3 58021353 58021374 IRF1 JASPAR yes 2667249
Genes associated with rs117948013[chr3:58021353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More