EnhancerDB
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  3. rs117959582[chr12:125208187]
Enhancers that have rs117959582[chr12:125208187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117959582[chr12:125208187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125208106 125208482 ZNF143 GTRD no Epithelial (MCF-7) 21582341
chr12 125208182 125208197 SOX21 JASPAR yes 124413692
chr12 125208182 125208198 SOX4 JASPAR yes 124413693
chr12 125208182 125208198 SOX8 JASPAR yes 124413694
chr12 125208186 125208207 IRF1 JASPAR yes 124413695
chr12 125208187 125208208 IRF1 JASPAR yes 124413696
Genes associated with rs117959582[chr12:125208187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More