EnhancerDB
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  3. rs11800559[chr1:41865464]
Enhancers that have rs11800559[chr1:41865464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11800559[chr1:41865464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41865459 41865473 RORA JASPAR yes 28385311
chr1 41865460 41865470 RORA JASPAR yes 28385312
chr1 41865460 41865477 RARA JASPAR yes 28385313
Genes associated with rs11800559[chr1:41865464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More