EnhancerDB
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  3. rs11802789[chr1:171397212]
Enhancers that have rs11802789[chr1:171397212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs11802789[chr1:171397212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171396964 171397306 SOX2 GTRD no Neural Stem Cells (H9) 21349641
chr1 171397211 171397227 POU4F2 JASPAR yes 33079507
chr1 171397211 171397227 POU4F3 JASPAR yes 33079508
Genes associated with rs11802789[chr1:171397212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More